Cluster: Rep_3394_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3394
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3394_c_11 | Rep_3394_c_11_1 | 3 | 1271 | + | 4.A.2.1.20 |
| STP | Rep_3394_c_11 | Rep_3394_c_11_2 | 1383 | 1646 | + | PTS-HPr |
| TC | Rep_3394_c_11 | Rep_3394_c_11_3 | 1679 | 3385 | + | 8.A.7.1.1 |
| pfam | Rep_3394_c_11 | Rep_3394_c_11_4 | 3618 | 4676 | + | URO-D |
| CAZyme | Rep_3394_c_11 | Rep_3394_c_11_5 | 4755 | 5615 | - | CE4 |
| TC | Rep_3394_c_11 | Rep_3394_c_11_6 | 5879 | 7474 | + | 2.A.35.2.1 |
| CAZyme | Rep_3394_c_11 | Rep_3394_c_11_7 | 7620 | 8813 | - | GT4 |
Gene ID: Rep_3394_c_11_1
Type: TC
Location: 3 - 1271 (+)
Type: TC
Location: 3 - 1271 (+)
Gene ID: Rep_3394_c_11_2
Type: STP
Location: 1383 - 1646 (+)
Type: STP
Location: 1383 - 1646 (+)
Gene ID: Rep_3394_c_11_3
Type: TC
Location: 1679 - 3385 (+)
Type: TC
Location: 1679 - 3385 (+)
Gene ID: Rep_3394_c_11_4
Type: pfam
Location: 3618 - 4676 (+)
Type: pfam
Location: 3618 - 4676 (+)
Gene ID: Rep_3394_c_11_5
Type: CAZyme
Location: 4755 - 5615 (-)
Type: CAZyme
Location: 4755 - 5615 (-)
Gene ID: Rep_3394_c_11_6
Type: TC
Location: 5879 - 7474 (+)
Type: TC
Location: 5879 - 7474 (+)
Gene ID: Rep_3394_c_11_7
Type: CAZyme
Location: 7620 - 8813 (-)
Type: CAZyme
Location: 7620 - 8813 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CABSLJ01
Species
CABSLJ01 sp902478455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.