Cluster: Rep_3394_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3394
- CGC Family ID: CGCFAM_00277
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3394_c_4 | Rep_3394_c_4_3 | 3378 | 4226 | - | 3.A.1.1.11 |
| TC | Rep_3394_c_4 | Rep_3394_c_4_4 | 4249 | 5190 | - | 3.A.1.1.41 |
| STP | Rep_3394_c_4 | Rep_3394_c_4_5 | 5263 | 6726 | - | SBP_bac_1 |
| TC | Rep_3394_c_4 | Rep_3394_c_4_6 | 6882 | 8663 | - | 8.A.59.2.1 |
| TF | Rep_3394_c_4 | Rep_3394_c_4_7 | 8696 | 10099 | - | HTH_AraC |
| pfam | Rep_3394_c_4 | Rep_3394_c_4_8 | 10305 | 11306 | - | URO-D |
| CAZyme | Rep_3394_c_4 | Rep_3394_c_4_9 | 11573 | 12589 | + | GH130_5 |
| CAZyme | Rep_3394_c_4 | Rep_3394_c_4_10 | 12593 | 15103 | + | GH2 |
Gene ID: Rep_3394_c_4_3
Type: TC
Location: 3378 - 4226 (-)
Type: TC
Location: 3378 - 4226 (-)
Gene ID: Rep_3394_c_4_4
Type: TC
Location: 4249 - 5190 (-)
Type: TC
Location: 4249 - 5190 (-)
Gene ID: Rep_3394_c_4_5
Type: STP
Location: 5263 - 6726 (-)
Type: STP
Location: 5263 - 6726 (-)
Gene ID: Rep_3394_c_4_6
Type: TC
Location: 6882 - 8663 (-)
Type: TC
Location: 6882 - 8663 (-)
Gene ID: Rep_3394_c_4_7
Type: TF
Location: 8696 - 10099 (-)
Type: TF
Location: 8696 - 10099 (-)
Gene ID: Rep_3394_c_4_8
Type: pfam
Location: 10305 - 11306 (-)
Type: pfam
Location: 10305 - 11306 (-)
Gene ID: Rep_3394_c_4_9
Type: CAZyme
Location: 11573 - 12589 (+)
Type: CAZyme
Location: 11573 - 12589 (+)
Gene ID: Rep_3394_c_4_10
Type: CAZyme
Location: 12593 - 15103 (+)
Type: CAZyme
Location: 12593 - 15103 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CABSLJ01
Species
CABSLJ01 sp902478455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.