Cluster: Rep_3394_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3394
- CGC Family ID: CGCFAM_00248
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3394_c_152 | Rep_3394_c_152_5 | 1718 | 2410 | + | 1.C.82.1.1 |
| pfam | Rep_3394_c_152 | Rep_3394_c_152_6 | 2642 | 3172 | + | Ribosomal_L10 |
| pfam | Rep_3394_c_152 | Rep_3394_c_152_7 | 3237 | 3614 | + | Ribosomal_L12 | Ribosomal_L12_N |
| CAZyme | Rep_3394_c_152 | Rep_3394_c_152_8 | 4135 | 6048 | + | GH3 |
Gene ID: Rep_3394_c_152_5
Type: TC
Location: 1718 - 2410 (+)
Type: TC
Location: 1718 - 2410 (+)
Gene ID: Rep_3394_c_152_6
Type: pfam
Location: 2642 - 3172 (+)
Type: pfam
Location: 2642 - 3172 (+)
Gene ID: Rep_3394_c_152_7
Type: pfam
Location: 3237 - 3614 (+)
Type: pfam
Location: 3237 - 3614 (+)
Gene ID: Rep_3394_c_152_8
Type: CAZyme
Location: 4135 - 6048 (+)
Type: CAZyme
Location: 4135 - 6048 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CABSLJ01
Species
CABSLJ01 sp902478455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.