Cluster: Rep_3376_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3376
- CGC Family ID: CGCFAM_01717
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3376_c_11 | Rep_3376_c_11_1 | 313 | 1023 | + | 3.A.1.132.6 |
| NULL(UNKNOWN) | Rep_3376_c_11 | Rep_3376_c_11_2 | 1004 | 1825 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3376_c_11 | Rep_3376_c_11_3 | 1893 | 2495 | + | Cyclase |
| TC | Rep_3376_c_11 | Rep_3376_c_11_4 | 2714 | 3328 | + | 9.B.18.1.2 |
| CAZyme | Rep_3376_c_11 | Rep_3376_c_11_5 | 3446 | 6493 | + | GH2 |
| TC | Rep_3376_c_11 | Rep_3376_c_11_6 | 7299 | 10016 | + | 3.A.3.4.1 |
Gene ID: Rep_3376_c_11_1
Type: TC
Location: 313 - 1023 (+)
Type: TC
Location: 313 - 1023 (+)
Gene ID: Rep_3376_c_11_2
Type:
Location: 1004 - 1825 (+)
Type:
Location: 1004 - 1825 (+)
Gene ID: Rep_3376_c_11_3
Type: pfam
Location: 1893 - 2495 (+)
Type: pfam
Location: 1893 - 2495 (+)
Gene ID: Rep_3376_c_11_4
Type: TC
Location: 2714 - 3328 (+)
Type: TC
Location: 2714 - 3328 (+)
Gene ID: Rep_3376_c_11_5
Type: CAZyme
Location: 3446 - 6493 (+)
Type: CAZyme
Location: 3446 - 6493 (+)
Gene ID: Rep_3376_c_11_6
Type: TC
Location: 7299 - 10016 (+)
Type: TC
Location: 7299 - 10016 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Fimivicinus
Species
Fimivicinus sp002320555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.