Cluster: Rep_3376_CGC6
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3376
- CGC Family ID: CGCFAM_02140
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3376_c_8 | Rep_3376_c_8_36 | 32070 | 32822 | + | 3.A.1.140.1 |
| pfam | Rep_3376_c_8 | Rep_3376_c_8_37 | 32819 | 33730 | + | FtsX | FtsX_ECD |
| STP | Rep_3376_c_8 | Rep_3376_c_8_38 | 33723 | 35042 | + | Peptidase_M23 |
| TC | Rep_3376_c_8 | Rep_3376_c_8_39 | 35062 | 36264 | + | 9.B.174.1.2 |
| CAZyme | Rep_3376_c_8 | Rep_3376_c_8_40 | 36749 | 37480 | + | GT2 |
| pfam | Rep_3376_c_8 | Rep_3376_c_8_41 | 37557 | 38348 | + | Glycos_transf_2 |
| TC | Rep_3376_c_8 | Rep_3376_c_8_42 | 38381 | 39244 | + | 3.A.1.104.1 |
| TC | Rep_3376_c_8 | Rep_3376_c_8_43 | 39257 | 40000 | + | 3.A.1.103.5 |
| pfam | Rep_3376_c_8 | Rep_3376_c_8_44 | 40080 | 40796 | + | IspD | CTP_transf_3 | NTP_transf_3 |
| pfam | Rep_3376_c_8 | Rep_3376_c_8_45 | 40789 | 41814 | + | ADH_zinc_N | ADH_N |
| CAZyme | Rep_3376_c_8 | Rep_3376_c_8_46 | 41956 | 43308 | + | GT2 |
| pfam | Rep_3376_c_8 | Rep_3376_c_8_47 | 43325 | 44497 | + | Glyphos_transf |
| CAZyme | Rep_3376_c_8 | Rep_3376_c_8_48 | 44813 | 47266 | + | GH95 |
Gene ID: Rep_3376_c_8_36
Type: TC
Location: 32070 - 32822 (+)
Type: TC
Location: 32070 - 32822 (+)
Gene ID: Rep_3376_c_8_37
Type: pfam
Location: 32819 - 33730 (+)
Type: pfam
Location: 32819 - 33730 (+)
Gene ID: Rep_3376_c_8_38
Type: STP
Location: 33723 - 35042 (+)
Type: STP
Location: 33723 - 35042 (+)
Gene ID: Rep_3376_c_8_39
Type: TC
Location: 35062 - 36264 (+)
Type: TC
Location: 35062 - 36264 (+)
Gene ID: Rep_3376_c_8_40
Type: CAZyme
Location: 36749 - 37480 (+)
Type: CAZyme
Location: 36749 - 37480 (+)
Gene ID: Rep_3376_c_8_41
Type: pfam
Location: 37557 - 38348 (+)
Type: pfam
Location: 37557 - 38348 (+)
Gene ID: Rep_3376_c_8_42
Type: TC
Location: 38381 - 39244 (+)
Type: TC
Location: 38381 - 39244 (+)
Gene ID: Rep_3376_c_8_43
Type: TC
Location: 39257 - 40000 (+)
Type: TC
Location: 39257 - 40000 (+)
Gene ID: Rep_3376_c_8_44
Type: pfam
Location: 40080 - 40796 (+)
Type: pfam
Location: 40080 - 40796 (+)
Gene ID: Rep_3376_c_8_45
Type: pfam
Location: 40789 - 41814 (+)
Type: pfam
Location: 40789 - 41814 (+)
Gene ID: Rep_3376_c_8_46
Type: CAZyme
Location: 41956 - 43308 (+)
Type: CAZyme
Location: 41956 - 43308 (+)
Gene ID: Rep_3376_c_8_47
Type: pfam
Location: 43325 - 44497 (+)
Type: pfam
Location: 43325 - 44497 (+)
Gene ID: Rep_3376_c_8_48
Type: CAZyme
Location: 44813 - 47266 (+)
Type: CAZyme
Location: 44813 - 47266 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Fimivicinus
Species
Fimivicinus sp002320555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.