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Cluster: Rep_3376_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3376_c_59 Rep_3376_c_59_1 280 1260 + CE4
TC Rep_3376_c_59 Rep_3376_c_59_2 1535 2914 - 2.A.66.1.23
TC Rep_3376_c_59 Rep_3376_c_59_3 3386 3835 + 3.A.11.1.1
TC Rep_3376_c_59 Rep_3376_c_59_4 3952 5367 + 2.A.50.2.1
pfam Rep_3376_c_59 Rep_3376_c_59_5 5386 6771 + DHHW | DHHW | ALGX
pfam Rep_3376_c_59 Rep_3376_c_59_6 7004 8677 + Rotamase | Rotamase_3
TC Rep_3376_c_59 Rep_3376_c_59_7 9037 10176 - 3.B.1.1.2
pfam Rep_3376_c_59 Rep_3376_c_59_8 10193 10600 - Biotin_lipoyl | Biotin_lipoyl_2
pfam Rep_3376_c_59 Rep_3376_c_59_9 10616 11089 - OAD_gamma
TC Rep_3376_c_59 Rep_3376_c_59_10 11108 12487 - 3.B.1.1.6
Gene ID: Rep_3376_c_59_1
Type: CAZyme
Location: 280 - 1260 (+)
Gene ID: Rep_3376_c_59_2
Type: TC
Location: 1535 - 2914 (-)
Gene ID: Rep_3376_c_59_3
Type: TC
Location: 3386 - 3835 (+)
Gene ID: Rep_3376_c_59_4
Type: TC
Location: 3952 - 5367 (+)
Gene ID: Rep_3376_c_59_5
Type: pfam
Location: 5386 - 6771 (+)
Gene ID: Rep_3376_c_59_6
Type: pfam
Location: 7004 - 8677 (+)
Gene ID: Rep_3376_c_59_7
Type: TC
Location: 9037 - 10176 (-)
Gene ID: Rep_3376_c_59_8
Type: pfam
Location: 10193 - 10600 (-)
Gene ID: Rep_3376_c_59_9
Type: pfam
Location: 10616 - 11089 (-)
Gene ID: Rep_3376_c_59_10
Type: TC
Location: 11108 - 12487 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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