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Cluster: Rep_3372_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3372_c_88 Rep_3372_c_88_2 1004 2083 - GT2
CAZyme Rep_3372_c_88 Rep_3372_c_88_3 2235 4214 + GH2
pfam Rep_3372_c_88 Rep_3372_c_88_4 4279 5334 - Exo_endo_phos
TF Rep_3372_c_88 Rep_3372_c_88_5 5580 6329 - GntR
TC Rep_3372_c_88 Rep_3372_c_88_6 6515 8506 + 4.A.1.2.13
CAZyme Rep_3372_c_88 Rep_3372_c_88_7 8503 10155 + GH13_29
STP Rep_3372_c_88 Rep_3372_c_88_8 10204 10461 + PTS-HPr
TC Rep_3372_c_88 Rep_3372_c_88_9 10510 12138 + 8.A.7.1.1
NULL(UNKNOWN) Rep_3372_c_88 Rep_3372_c_88_10 12344 12658 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3372_c_88 Rep_3372_c_88_11 12661 13716 + 3.A.2.3.1
TC Rep_3372_c_88 Rep_3372_c_88_12 13731 15704 + 3.A.2.3.3
Gene ID: Rep_3372_c_88_2
Type: CAZyme
Location: 1004 - 2083 (-)
Gene ID: Rep_3372_c_88_3
Type: CAZyme
Location: 2235 - 4214 (+)
Gene ID: Rep_3372_c_88_4
Type: pfam
Location: 4279 - 5334 (-)
Gene ID: Rep_3372_c_88_5
Type: TF
Location: 5580 - 6329 (-)
Gene ID: Rep_3372_c_88_6
Type: TC
Location: 6515 - 8506 (+)
Gene ID: Rep_3372_c_88_7
Type: CAZyme
Location: 8503 - 10155 (+)
Gene ID: Rep_3372_c_88_8
Type: STP
Location: 10204 - 10461 (+)
Gene ID: Rep_3372_c_88_9
Type: TC
Location: 10510 - 12138 (+)
Gene ID: Rep_3372_c_88_10
Type:
Location: 12344 - 12658 (+)
Gene ID: Rep_3372_c_88_11
Type: TC
Location: 12661 - 13716 (+)
Gene ID: Rep_3372_c_88_12
Type: TC
Location: 13731 - 15704 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Onthovicinus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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