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Cluster: Rep_3372_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3372_c_3 Rep_3372_c_3_19 18215 19594 - 2.A.25.1.9
CAZyme Rep_3372_c_3 Rep_3372_c_3_20 19884 23081 + GH38
TC Rep_3372_c_3 Rep_3372_c_3_21 23182 24918 - 1.A.34.1.3
STP Rep_3372_c_3 Rep_3372_c_3_22 25120 26850 - Peptidase_M23
pfam Rep_3372_c_3 Rep_3372_c_3_23 26870 27814 - Zn_dep_PLPC
TC Rep_3372_c_3 Rep_3372_c_3_24 28005 28727 - 3.A.1.3.25
TC Rep_3372_c_3 Rep_3372_c_3_25 28714 29469 - 3.A.1.3.20
TC Rep_3372_c_3 Rep_3372_c_3_26 29573 30502 - 3.A.1.3.27
pfam Rep_3372_c_3 Rep_3372_c_3_27 30585 31466 - PseudoU_synth_2
pfam Rep_3372_c_3 Rep_3372_c_3_28 31512 32582 - Aminotran_4
CAZyme Rep_3372_c_3 Rep_3372_c_3_29 32667 34406 - GH2
Gene ID: Rep_3372_c_3_19
Type: TC
Location: 18215 - 19594 (-)
Gene ID: Rep_3372_c_3_20
Type: CAZyme
Location: 19884 - 23081 (+)
Gene ID: Rep_3372_c_3_21
Type: TC
Location: 23182 - 24918 (-)
Gene ID: Rep_3372_c_3_22
Type: STP
Location: 25120 - 26850 (-)
Gene ID: Rep_3372_c_3_23
Type: pfam
Location: 26870 - 27814 (-)
Gene ID: Rep_3372_c_3_24
Type: TC
Location: 28005 - 28727 (-)
Gene ID: Rep_3372_c_3_25
Type: TC
Location: 28714 - 29469 (-)
Gene ID: Rep_3372_c_3_26
Type: TC
Location: 29573 - 30502 (-)
Gene ID: Rep_3372_c_3_27
Type: pfam
Location: 30585 - 31466 (-)
Gene ID: Rep_3372_c_3_28
Type: pfam
Location: 31512 - 32582 (-)
Gene ID: Rep_3372_c_3_29
Type: CAZyme
Location: 32667 - 34406 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Onthovicinus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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