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Cluster: Rep_336_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_336_c_25 Rep_336_c_25_2 1324 5229 - GH85
NULL(UNKNOWN) Rep_336_c_25 Rep_336_c_25_3 5424 5636 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_336_c_25 Rep_336_c_25_4 5626 9459 - GH85
NULL(UNKNOWN) Rep_336_c_25 Rep_336_c_25_5 9747 12032 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_336_c_25 Rep_336_c_25_6 12047 13822 - 8.A.46.2.1
TC Rep_336_c_25 Rep_336_c_25_7 13843 17133 - 1.B.14.6.13
pfam Rep_336_c_25 Rep_336_c_25_8 18013 19062 + Radical_SAM | RlmN_N
CAZyme Rep_336_c_25 Rep_336_c_25_9 19076 20824 - GH123
Gene ID: Rep_336_c_25_2
Type: CAZyme
Location: 1324 - 5229 (-)
Gene ID: Rep_336_c_25_3
Type:
Location: 5424 - 5636 (+)
Gene ID: Rep_336_c_25_4
Type: CAZyme
Location: 5626 - 9459 (-)
Gene ID: Rep_336_c_25_5
Type:
Location: 9747 - 12032 (-)
Gene ID: Rep_336_c_25_6
Type: TC
Location: 12047 - 13822 (-)
Gene ID: Rep_336_c_25_7
Type: TC
Location: 13843 - 17133 (-)
Gene ID: Rep_336_c_25_8
Type: pfam
Location: 18013 - 19062 (+)
Gene ID: Rep_336_c_25_9
Type: CAZyme
Location: 19076 - 20824 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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