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Cluster: Rep_336_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_336_c_0 Rep_336_c_0_17 19822 21486 + 4.C.1.1.7
pfam Rep_336_c_0 Rep_336_c_0_18 21543 22088 - OMP_b-brl
pfam Rep_336_c_0 Rep_336_c_0_19 22219 24132 + CN_hydrolase | NAD_synthase
CAZyme Rep_336_c_0 Rep_336_c_0_20 24306 26555 + GH92
peptidase Rep_336_c_0 Rep_336_c_0_21 26628 27320 + S14.UPW
STP Rep_336_c_0 Rep_336_c_0_22 27365 28654 + AAA
TC Rep_336_c_0 Rep_336_c_0_23 28701 30881 + 2.A.16.2.2
TC Rep_336_c_0 Rep_336_c_0_24 30908 31570 + 3.A.1.140.1
Gene ID: Rep_336_c_0_17
Type: TC
Location: 19822 - 21486 (+)
Gene ID: Rep_336_c_0_18
Type: pfam
Location: 21543 - 22088 (-)
Gene ID: Rep_336_c_0_19
Type: pfam
Location: 22219 - 24132 (+)
Gene ID: Rep_336_c_0_20
Type: CAZyme
Location: 24306 - 26555 (+)
Gene ID: Rep_336_c_0_21
Type: peptidase
Location: 26628 - 27320 (+)
Gene ID: Rep_336_c_0_22
Type: STP
Location: 27365 - 28654 (+)
Gene ID: Rep_336_c_0_23
Type: TC
Location: 28701 - 30881 (+)
Gene ID: Rep_336_c_0_24
Type: TC
Location: 30908 - 31570 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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