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Cluster: Rep_3366_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3366_c_24 Rep_3366_c_24_14 12997 14295 - 2.A.25.1.3
pfam Rep_3366_c_24 Rep_3366_c_24_15 14288 14836 - Amidase_3
CAZyme Rep_3366_c_24 Rep_3366_c_24_16 14887 15768 - CE4
TC Rep_3366_c_24 Rep_3366_c_24_17 15965 16660 - 1.C.113.1.3
TC Rep_3366_c_24 Rep_3366_c_24_18 17152 18984 + 3.A.1.135.5
TC Rep_3366_c_24 Rep_3366_c_24_19 19301 21145 + 3.A.1.106.3
pfam Rep_3366_c_24 Rep_3366_c_24_20 21347 21562 + HTH_26
NULL(UNKNOWN) Rep_3366_c_24 Rep_3366_c_24_21 21929 22243 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3366_c_24 Rep_3366_c_24_22 22519 23493 - 3.A.1.5.20
TC Rep_3366_c_24 Rep_3366_c_24_23 23486 24499 - 3.A.1.5.2
TC Rep_3366_c_24 Rep_3366_c_24_24 24506 25444 - 3.A.1.5.2
TC Rep_3366_c_24 Rep_3366_c_24_25 25446 26390 - 3.A.1.5.2
TC Rep_3366_c_24 Rep_3366_c_24_26 26776 28521 - 3.A.1.5.2
Gene ID: Rep_3366_c_24_14
Type: TC
Location: 12997 - 14295 (-)
Gene ID: Rep_3366_c_24_15
Type: pfam
Location: 14288 - 14836 (-)
Gene ID: Rep_3366_c_24_16
Type: CAZyme
Location: 14887 - 15768 (-)
Gene ID: Rep_3366_c_24_17
Type: TC
Location: 15965 - 16660 (-)
Gene ID: Rep_3366_c_24_18
Type: TC
Location: 17152 - 18984 (+)
Gene ID: Rep_3366_c_24_19
Type: TC
Location: 19301 - 21145 (+)
Gene ID: Rep_3366_c_24_20
Type: pfam
Location: 21347 - 21562 (+)
Gene ID: Rep_3366_c_24_21
Type:
Location: 21929 - 22243 (+)
Gene ID: Rep_3366_c_24_22
Type: TC
Location: 22519 - 23493 (-)
Gene ID: Rep_3366_c_24_23
Type: TC
Location: 23486 - 24499 (-)
Gene ID: Rep_3366_c_24_24
Type: TC
Location: 24506 - 25444 (-)
Gene ID: Rep_3366_c_24_25
Type: TC
Location: 25446 - 26390 (-)
Gene ID: Rep_3366_c_24_26
Type: TC
Location: 26776 - 28521 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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