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Cluster: Rep_3366_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3366_c_19 Rep_3366_c_19_20 23699 25009 - 2.A.66.1.32
TC Rep_3366_c_19 Rep_3366_c_19_21 25349 26332 + 3.A.1.1.29
TC Rep_3366_c_19 Rep_3366_c_19_22 26349 27251 + 3.A.1.1.29
STP Rep_3366_c_19 Rep_3366_c_19_23 27313 28824 + SBP_bac_1
pfam Rep_3366_c_19 Rep_3366_c_19_24 29020 29439 + Ureidogly_lyase
CAZyme Rep_3366_c_19 Rep_3366_c_19_25 29573 32422 + GH55_3
TC Rep_3366_c_19 Rep_3366_c_19_26 32447 34225 + 8.A.59.2.1
Gene ID: Rep_3366_c_19_20
Type: TC
Location: 23699 - 25009 (-)
Gene ID: Rep_3366_c_19_21
Type: TC
Location: 25349 - 26332 (+)
Gene ID: Rep_3366_c_19_22
Type: TC
Location: 26349 - 27251 (+)
Gene ID: Rep_3366_c_19_23
Type: STP
Location: 27313 - 28824 (+)
Gene ID: Rep_3366_c_19_24
Type: pfam
Location: 29020 - 29439 (+)
Gene ID: Rep_3366_c_19_25
Type: CAZyme
Location: 29573 - 32422 (+)
Gene ID: Rep_3366_c_19_26
Type: TC
Location: 32447 - 34225 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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