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Cluster: Rep_3366_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3366_c_15 Rep_3366_c_15_51 57067 57798 - GT26
TC Rep_3366_c_15 Rep_3366_c_15_52 57788 59224 - 9.B.18.1.3
pfam Rep_3366_c_15 Rep_3366_c_15_53 59431 60555 - Aldo_ket_red | Fer4_7 | Fer4_8 | Fer4_9 | Fer4_10 | Fer4_17
pfam Rep_3366_c_15 Rep_3366_c_15_54 60748 61152 + DUF2752
CAZyme Rep_3366_c_15 Rep_3366_c_15_55 61291 63132 + GH146
NULL(UNKNOWN) Rep_3366_c_15 Rep_3366_c_15_56 63258 63521 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_3366_c_15 Rep_3366_c_15_57 63992 64567 + DUF4364
CAZyme Rep_3366_c_15 Rep_3366_c_15_58 64669 66849 + GH36
Gene ID: Rep_3366_c_15_51
Type: CAZyme
Location: 57067 - 57798 (-)
Gene ID: Rep_3366_c_15_52
Type: TC
Location: 57788 - 59224 (-)
Gene ID: Rep_3366_c_15_53
Type: pfam
Location: 59431 - 60555 (-)
Gene ID: Rep_3366_c_15_54
Type: pfam
Location: 60748 - 61152 (+)
Gene ID: Rep_3366_c_15_55
Type: CAZyme
Location: 61291 - 63132 (+)
Gene ID: Rep_3366_c_15_56
Type:
Location: 63258 - 63521 (-)
Gene ID: Rep_3366_c_15_57
Type: pfam
Location: 63992 - 64567 (+)
Gene ID: Rep_3366_c_15_58
Type: CAZyme
Location: 64669 - 66849 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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