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Cluster: Rep_3366_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3366_c_13 Rep_3366_c_13_20 19943 22201 - GT35
CAZyme Rep_3366_c_13 Rep_3366_c_13_21 22229 23722 - GH77
CAZyme Rep_3366_c_13 Rep_3366_c_13_22 23738 25018 - GH13
TF Rep_3366_c_13 Rep_3366_c_13_23 25120 26148 - LacI
TC Rep_3366_c_13 Rep_3366_c_13_24 26298 28145 + 2.A.16.2.2
Gene ID: Rep_3366_c_13_20
Type: CAZyme
Location: 19943 - 22201 (-)
Gene ID: Rep_3366_c_13_21
Type: CAZyme
Location: 22229 - 23722 (-)
Gene ID: Rep_3366_c_13_22
Type: CAZyme
Location: 23738 - 25018 (-)
Gene ID: Rep_3366_c_13_23
Type: TF
Location: 25120 - 26148 (-)
Gene ID: Rep_3366_c_13_24
Type: TC
Location: 26298 - 28145 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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