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Cluster: Rep_3366_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3366_c_0 Rep_3366_c_0_91 111005 111586 - 2.A.107.1.2
pfam Rep_3366_c_0 Rep_3366_c_0_92 111664 112038 - TauE
pfam Rep_3366_c_0 Rep_3366_c_0_93 112035 112394 - TauE
TC Rep_3366_c_0 Rep_3366_c_0_94 112577 113956 + 2.A.66.1.32
NULL(UNKNOWN) Rep_3366_c_0 Rep_3366_c_0_95 114074 115042 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3366_c_0 Rep_3366_c_0_96 115063 116337 - GH125
TC Rep_3366_c_0 Rep_3366_c_0_97 116575 117297 - 3.A.1.3.25
TC Rep_3366_c_0 Rep_3366_c_0_98 117284 118018 - 3.A.1.3.15
TC Rep_3366_c_0 Rep_3366_c_0_99 118328 119140 - 3.A.1.3.15
CAZyme Rep_3366_c_0 Rep_3366_c_0_100 119562 122624 + GH106
Gene ID: Rep_3366_c_0_91
Type: TC
Location: 111005 - 111586 (-)
Gene ID: Rep_3366_c_0_92
Type: pfam
Location: 111664 - 112038 (-)
Gene ID: Rep_3366_c_0_93
Type: pfam
Location: 112035 - 112394 (-)
Gene ID: Rep_3366_c_0_94
Type: TC
Location: 112577 - 113956 (+)
Gene ID: Rep_3366_c_0_95
Type:
Location: 114074 - 115042 (-)
Gene ID: Rep_3366_c_0_96
Type: CAZyme
Location: 115063 - 116337 (-)
Gene ID: Rep_3366_c_0_97
Type: TC
Location: 116575 - 117297 (-)
Gene ID: Rep_3366_c_0_98
Type: TC
Location: 117284 - 118018 (-)
Gene ID: Rep_3366_c_0_99
Type: TC
Location: 118328 - 119140 (-)
Gene ID: Rep_3366_c_0_100
Type: CAZyme
Location: 119562 - 122624 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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