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Cluster: Rep_3366_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3366_c_6 Rep_3366_c_6_80 90899 92650 + CBM34 | GH13_20
CAZyme Rep_3366_c_6 Rep_3366_c_6_81 92682 93761 + GH179
CAZyme Rep_3366_c_6 Rep_3366_c_6_82 93903 95291 + GH32
CAZyme Rep_3366_c_6 Rep_3366_c_6_83 95519 97879 + GH31_3
TC Rep_3366_c_6 Rep_3366_c_6_84 98150 99484 + 3.A.1.1.28
TC Rep_3366_c_6 Rep_3366_c_6_85 99568 100482 + 3.A.1.1.28
TC Rep_3366_c_6 Rep_3366_c_6_86 100482 101321 + 3.A.1.1.28
TC Rep_3366_c_6 Rep_3366_c_6_87 101571 103493 + 8.A.59.2.1
Gene ID: Rep_3366_c_6_80
Type: CAZyme
Location: 90899 - 92650 (+)
Gene ID: Rep_3366_c_6_81
Type: CAZyme
Location: 92682 - 93761 (+)
Gene ID: Rep_3366_c_6_82
Type: CAZyme
Location: 93903 - 95291 (+)
Gene ID: Rep_3366_c_6_83
Type: CAZyme
Location: 95519 - 97879 (+)
Gene ID: Rep_3366_c_6_84
Type: TC
Location: 98150 - 99484 (+)
Gene ID: Rep_3366_c_6_85
Type: TC
Location: 99568 - 100482 (+)
Gene ID: Rep_3366_c_6_86
Type: TC
Location: 100482 - 101321 (+)
Gene ID: Rep_3366_c_6_87
Type: TC
Location: 101571 - 103493 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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