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Cluster: Rep_3366_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3366_c_4 Rep_3366_c_4_77 75500 77251 - 8.A.59.2.1
peptidase Rep_3366_c_4 Rep_3366_c_4_78 77458 78147 + S33.UPW
NULL(UNKNOWN) Rep_3366_c_4 Rep_3366_c_4_79 78173 79675 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3366_c_4 Rep_3366_c_4_80 80186 81151 + 3.A.1.1.10
TC Rep_3366_c_4 Rep_3366_c_4_81 81191 82093 + 3.A.1.1.10
TC Rep_3366_c_4 Rep_3366_c_4_82 82208 83878 + 3.A.1.1.29
CAZyme Rep_3366_c_4 Rep_3366_c_4_83 84004 85080 + GH179
CAZyme Rep_3366_c_4 Rep_3366_c_4_84 85257 86372 + GH172
pfam Rep_3366_c_4 Rep_3366_c_4_85 86512 87435 + DUF1848
TC Rep_3366_c_4 Rep_3366_c_4_86 87493 87822 - 2.A.78.1.1
TC Rep_3366_c_4 Rep_3366_c_4_87 87819 88547 - 2.A.78.1.1
pfam Rep_3366_c_4 Rep_3366_c_4_88 88698 89207 + Flavin_Reduct
pfam Rep_3366_c_4 Rep_3366_c_4_89 89303 89860 - PAP2 | PAP2_3
TC Rep_3366_c_4 Rep_3366_c_4_90 90068 92716 + 3.A.3.2.21
Gene ID: Rep_3366_c_4_77
Type: TC
Location: 75500 - 77251 (-)
Gene ID: Rep_3366_c_4_78
Type: peptidase
Location: 77458 - 78147 (+)
Gene ID: Rep_3366_c_4_79
Type:
Location: 78173 - 79675 (+)
Gene ID: Rep_3366_c_4_80
Type: TC
Location: 80186 - 81151 (+)
Gene ID: Rep_3366_c_4_81
Type: TC
Location: 81191 - 82093 (+)
Gene ID: Rep_3366_c_4_82
Type: TC
Location: 82208 - 83878 (+)
Gene ID: Rep_3366_c_4_83
Type: CAZyme
Location: 84004 - 85080 (+)
Gene ID: Rep_3366_c_4_84
Type: CAZyme
Location: 85257 - 86372 (+)
Gene ID: Rep_3366_c_4_85
Type: pfam
Location: 86512 - 87435 (+)
Gene ID: Rep_3366_c_4_86
Type: TC
Location: 87493 - 87822 (-)
Gene ID: Rep_3366_c_4_87
Type: TC
Location: 87819 - 88547 (-)
Gene ID: Rep_3366_c_4_88
Type: pfam
Location: 88698 - 89207 (+)
Gene ID: Rep_3366_c_4_89
Type: pfam
Location: 89303 - 89860 (-)
Gene ID: Rep_3366_c_4_90
Type: TC
Location: 90068 - 92716 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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