Cluster: Rep_3366_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3366
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3366_c_3 | Rep_3366_c_3_57 | 71438 | 72994 | - | 3.A.1.121.4 |
| pfam | Rep_3366_c_3 | Rep_3366_c_3_58 | 73133 | 74653 | - | Carb_kinase | YjeF_N |
| pfam | Rep_3366_c_3 | Rep_3366_c_3_59 | 75004 | 75654 | + | CbiM | ECF-ribofla_trS | ECF_trnsprt |
| CAZyme | Rep_3366_c_3 | Rep_3366_c_3_60 | 75783 | 77507 | - | GH2 |
| TF | Rep_3366_c_3 | Rep_3366_c_3_61 | 77833 | 78654 | + | HTH_AraC | HTH_AraC |
| pfam | Rep_3366_c_3 | Rep_3366_c_3_62 | 78715 | 79254 | - | DUF6106 |
| CAZyme | Rep_3366_c_3 | Rep_3366_c_3_63 | 79374 | 81185 | - | GH13_31 |
Gene ID: Rep_3366_c_3_57
Type: TC
Location: 71438 - 72994 (-)
Type: TC
Location: 71438 - 72994 (-)
Gene ID: Rep_3366_c_3_58
Type: pfam
Location: 73133 - 74653 (-)
Type: pfam
Location: 73133 - 74653 (-)
Gene ID: Rep_3366_c_3_59
Type: pfam
Location: 75004 - 75654 (+)
Type: pfam
Location: 75004 - 75654 (+)
Gene ID: Rep_3366_c_3_60
Type: CAZyme
Location: 75783 - 77507 (-)
Type: CAZyme
Location: 75783 - 77507 (-)
Gene ID: Rep_3366_c_3_61
Type: TF
Location: 77833 - 78654 (+)
Type: TF
Location: 77833 - 78654 (+)
Gene ID: Rep_3366_c_3_62
Type: pfam
Location: 78715 - 79254 (-)
Type: pfam
Location: 78715 - 79254 (-)
Gene ID: Rep_3366_c_3_63
Type: CAZyme
Location: 79374 - 81185 (-)
Type: CAZyme
Location: 79374 - 81185 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.