Cluster: Rep_3366_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3366
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3366_c_0 | Rep_3366_c_0_16 | 20991 | 23489 | - | 3.A.3.23.2 |
| pfam | Rep_3366_c_0 | Rep_3366_c_0_17 | 23514 | 24338 | - | AP_endonuc_2 |
| CAZyme | Rep_3366_c_0 | Rep_3366_c_0_18 | 24655 | 25347 | + | CBM13 |
| TF | Rep_3366_c_0 | Rep_3366_c_0_19 | 25532 | 25969 | + | LytTR |
| NULL(UNKNOWN) | Rep_3366_c_0 | Rep_3366_c_0_20 | 25983 | 26459 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3366_c_0 | Rep_3366_c_0_21 | 26763 | 27692 | + | 3.A.1.105.3 |
| TC | Rep_3366_c_0 | Rep_3366_c_0_22 | 27685 | 28539 | + | 3.A.1.130.1 |
Gene ID: Rep_3366_c_0_16
Type: TC
Location: 20991 - 23489 (-)
Type: TC
Location: 20991 - 23489 (-)
Gene ID: Rep_3366_c_0_17
Type: pfam
Location: 23514 - 24338 (-)
Type: pfam
Location: 23514 - 24338 (-)
Gene ID: Rep_3366_c_0_18
Type: CAZyme
Location: 24655 - 25347 (+)
Type: CAZyme
Location: 24655 - 25347 (+)
Gene ID: Rep_3366_c_0_19
Type: TF
Location: 25532 - 25969 (+)
Type: TF
Location: 25532 - 25969 (+)
Gene ID: Rep_3366_c_0_20
Type:
Location: 25983 - 26459 (+)
Type:
Location: 25983 - 26459 (+)
Gene ID: Rep_3366_c_0_21
Type: TC
Location: 26763 - 27692 (+)
Type: TC
Location: 26763 - 27692 (+)
Gene ID: Rep_3366_c_0_22
Type: TC
Location: 27685 - 28539 (+)
Type: TC
Location: 27685 - 28539 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.