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Cluster: Rep_3366_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3366_c_2 Rep_3366_c_2_143 145195 146559 - GH5_22
NULL(UNKNOWN) Rep_3366_c_2 Rep_3366_c_2_144 147064 148290 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3366_c_2 Rep_3366_c_2_145 148487 149896 + 2.A.35.1.1
pfam Rep_3366_c_2 Rep_3366_c_2_146 150012 150704 + Lyx_isomer
TC Rep_3366_c_2 Rep_3366_c_2_147 151260 152186 + 3.A.1.1.29
TC Rep_3366_c_2 Rep_3366_c_2_148 152188 153078 + 3.A.1.1.10
STP Rep_3366_c_2 Rep_3366_c_2_149 153212 154789 + SBP_bac_1
CAZyme Rep_3366_c_2 Rep_3366_c_2_150 154813 155955 + GH179
pfam Rep_3366_c_2 Rep_3366_c_2_151 156044 156877 + AP_endonuc_2
TF Rep_3366_c_2 Rep_3366_c_2_152 157110 159374 + HTH_AraC | HTH_AraC
TC Rep_3366_c_2 Rep_3366_c_2_153 159507 160895 - 2.A.66.1.25
TC Rep_3366_c_2 Rep_3366_c_2_154 161393 162349 + 3.A.1.1.10
TC Rep_3366_c_2 Rep_3366_c_2_155 162374 163273 + 3.A.1.1.29
Gene ID: Rep_3366_c_2_143
Type: CAZyme
Location: 145195 - 146559 (-)
Gene ID: Rep_3366_c_2_144
Type:
Location: 147064 - 148290 (+)
Gene ID: Rep_3366_c_2_145
Type: TC
Location: 148487 - 149896 (+)
Gene ID: Rep_3366_c_2_146
Type: pfam
Location: 150012 - 150704 (+)
Gene ID: Rep_3366_c_2_147
Type: TC
Location: 151260 - 152186 (+)
Gene ID: Rep_3366_c_2_148
Type: TC
Location: 152188 - 153078 (+)
Gene ID: Rep_3366_c_2_149
Type: STP
Location: 153212 - 154789 (+)
Gene ID: Rep_3366_c_2_150
Type: CAZyme
Location: 154813 - 155955 (+)
Gene ID: Rep_3366_c_2_151
Type: pfam
Location: 156044 - 156877 (+)
Gene ID: Rep_3366_c_2_152
Type: TF
Location: 157110 - 159374 (+)
Gene ID: Rep_3366_c_2_153
Type: TC
Location: 159507 - 160895 (-)
Gene ID: Rep_3366_c_2_154
Type: TC
Location: 161393 - 162349 (+)
Gene ID: Rep_3366_c_2_155
Type: TC
Location: 162374 - 163273 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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