Cluster: Rep_3366_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3366
- CGC Family ID: CGCFAM_00167
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3366_c_0 | Rep_3366_c_0_1 | 259 | 1212 | + | 3.A.1.1.10 |
| TC | Rep_3366_c_0 | Rep_3366_c_0_2 | 1227 | 2150 | + | 3.A.1.1.10 |
| TC | Rep_3366_c_0 | Rep_3366_c_0_3 | 2226 | 3887 | + | 3.A.1.1.9 |
| CAZyme | Rep_3366_c_0 | Rep_3366_c_0_4 | 4006 | 6597 | + | GH2 |
| CAZyme | Rep_3366_c_0 | Rep_3366_c_0_5 | 6634 | 9495 | + | GH3 |
Gene ID: Rep_3366_c_0_1
Type: TC
Location: 259 - 1212 (+)
Type: TC
Location: 259 - 1212 (+)
Gene ID: Rep_3366_c_0_2
Type: TC
Location: 1227 - 2150 (+)
Type: TC
Location: 1227 - 2150 (+)
Gene ID: Rep_3366_c_0_3
Type: TC
Location: 2226 - 3887 (+)
Type: TC
Location: 2226 - 3887 (+)
Gene ID: Rep_3366_c_0_4
Type: CAZyme
Location: 4006 - 6597 (+)
Type: CAZyme
Location: 4006 - 6597 (+)
Gene ID: Rep_3366_c_0_5
Type: CAZyme
Location: 6634 - 9495 (+)
Type: CAZyme
Location: 6634 - 9495 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.