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Cluster: Rep_3363_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3363_c_1 Rep_3363_c_1_133 148428 150287 - GH146
TC Rep_3363_c_1 Rep_3363_c_1_134 150301 151131 - 3.A.1.1.48
TC Rep_3363_c_1 Rep_3363_c_1_135 151128 152060 - 3.A.1.1.34
STP Rep_3363_c_1 Rep_3363_c_1_136 152225 153559 - SBP_bac_1
TC Rep_3363_c_1 Rep_3363_c_1_137 153993 155756 - 8.A.59.2.1
TF Rep_3363_c_1 Rep_3363_c_1_138 155769 157268 - HTH_AraC | HTH_AraC
CAZyme Rep_3363_c_1 Rep_3363_c_1_139 157696 159627 - GH127
TC Rep_3363_c_1 Rep_3363_c_1_140 159648 160439 - 3.A.1.1.47
TC Rep_3363_c_1 Rep_3363_c_1_141 160491 161375 - 3.A.1.1.20
STP Rep_3363_c_1 Rep_3363_c_1_142 161452 162798 - SBP_bac_1
TC Rep_3363_c_1 Rep_3363_c_1_143 163000 164739 + 9.B.33.1.1
Gene ID: Rep_3363_c_1_133
Type: CAZyme
Location: 148428 - 150287 (-)
Gene ID: Rep_3363_c_1_134
Type: TC
Location: 150301 - 151131 (-)
Gene ID: Rep_3363_c_1_135
Type: TC
Location: 151128 - 152060 (-)
Gene ID: Rep_3363_c_1_136
Type: STP
Location: 152225 - 153559 (-)
Gene ID: Rep_3363_c_1_137
Type: TC
Location: 153993 - 155756 (-)
Gene ID: Rep_3363_c_1_138
Type: TF
Location: 155769 - 157268 (-)
Gene ID: Rep_3363_c_1_139
Type: CAZyme
Location: 157696 - 159627 (-)
Gene ID: Rep_3363_c_1_140
Type: TC
Location: 159648 - 160439 (-)
Gene ID: Rep_3363_c_1_141
Type: TC
Location: 160491 - 161375 (-)
Gene ID: Rep_3363_c_1_142
Type: STP
Location: 161452 - 162798 (-)
Gene ID: Rep_3363_c_1_143
Type: TC
Location: 163000 - 164739 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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