Cluster: Rep_3363_CGC43
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3363
- CGC Family ID: CGCFAM_06993
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3363_c_55 | Rep_3363_c_55_5 | 5862 | 6749 | + | 3.A.1.1.28 |
| TC | Rep_3363_c_55 | Rep_3363_c_55_6 | 6746 | 7579 | + | 3.A.1.1.28 |
| CAZyme | Rep_3363_c_55 | Rep_3363_c_55_7 | 7671 | 9686 | + | GH151 |
| pfam | Rep_3363_c_55 | Rep_3363_c_55_8 | 9683 | 10807 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | Rep_3363_c_55 | Rep_3363_c_55_9 | 10831 | 12237 | + | GH32 |
Gene ID: Rep_3363_c_55_5
Type: TC
Location: 5862 - 6749 (+)
Type: TC
Location: 5862 - 6749 (+)
Gene ID: Rep_3363_c_55_6
Type: TC
Location: 6746 - 7579 (+)
Type: TC
Location: 6746 - 7579 (+)
Gene ID: Rep_3363_c_55_7
Type: CAZyme
Location: 7671 - 9686 (+)
Type: CAZyme
Location: 7671 - 9686 (+)
Gene ID: Rep_3363_c_55_8
Type: pfam
Location: 9683 - 10807 (+)
Type: pfam
Location: 9683 - 10807 (+)
Gene ID: Rep_3363_c_55_9
Type: CAZyme
Location: 10831 - 12237 (+)
Type: CAZyme
Location: 10831 - 12237 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A sp902490005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.