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Cluster: Rep_3363_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3363_c_48 Rep_3363_c_48_1 1 585 - 2.A.66.1.23
pfam Rep_3363_c_48 Rep_3363_c_48_2 709 1365 - Hydrolase | HAD | Hydrolase_like | HAD_2
TC Rep_3363_c_48 Rep_3363_c_48_3 1797 4328 + 4.C.1.1.4
pfam Rep_3363_c_48 Rep_3363_c_48_4 4449 5777 + Cons_hypoth95 | MTS | tRNA_U5-meth_tr | PrmA | Methyltransf_15 | Methyltransf_25 | Methyltransf_31
CAZyme Rep_3363_c_48 Rep_3363_c_48_5 5863 8613 - GH3
CAZyme Rep_3363_c_48 Rep_3363_c_48_6 8737 11775 - GH38
TF Rep_3363_c_48 Rep_3363_c_48_7 11799 13388 - HTH_AraC | HTH_AraC
TC Rep_3363_c_48 Rep_3363_c_48_8 13390 15186 - 8.A.59.2.1
Gene ID: Rep_3363_c_48_1
Type: TC
Location: 1 - 585 (-)
Gene ID: Rep_3363_c_48_2
Type: pfam
Location: 709 - 1365 (-)
Gene ID: Rep_3363_c_48_3
Type: TC
Location: 1797 - 4328 (+)
Gene ID: Rep_3363_c_48_4
Type: pfam
Location: 4449 - 5777 (+)
Gene ID: Rep_3363_c_48_5
Type: CAZyme
Location: 5863 - 8613 (-)
Gene ID: Rep_3363_c_48_6
Type: CAZyme
Location: 8737 - 11775 (-)
Gene ID: Rep_3363_c_48_7
Type: TF
Location: 11799 - 13388 (-)
Gene ID: Rep_3363_c_48_8
Type: TC
Location: 13390 - 15186 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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