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Cluster: Rep_3363_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3363_c_41 Rep_3363_c_41_1 831 9437 + CBM66 | CBM66 | CBM66
STP Rep_3363_c_41 Rep_3363_c_41_2 9578 10966 + SBP_bac_1
TC Rep_3363_c_41 Rep_3363_c_41_3 11057 11971 + 3.A.1.1.11
TC Rep_3363_c_41 Rep_3363_c_41_4 11978 12847 + 3.A.1.1.11
pfam Rep_3363_c_41 Rep_3363_c_41_5 12963 15434 + DUF5695
pfam Rep_3363_c_41 Rep_3363_c_41_6 15540 17015 + AraA_N | Arabinose_Iso_C | AraA_central
CAZyme Rep_3363_c_41 Rep_3363_c_41_7 17821 19341 - GH51_1
TF Rep_3363_c_41 Rep_3363_c_41_8 19510 20544 - LacI
CAZyme Rep_3363_c_41 Rep_3363_c_41_9 20846 22927 + GH36
Gene ID: Rep_3363_c_41_1
Type: CAZyme
Location: 831 - 9437 (+)
Gene ID: Rep_3363_c_41_2
Type: STP
Location: 9578 - 10966 (+)
Gene ID: Rep_3363_c_41_3
Type: TC
Location: 11057 - 11971 (+)
Gene ID: Rep_3363_c_41_4
Type: TC
Location: 11978 - 12847 (+)
Gene ID: Rep_3363_c_41_5
Type: pfam
Location: 12963 - 15434 (+)
Gene ID: Rep_3363_c_41_6
Type: pfam
Location: 15540 - 17015 (+)
Gene ID: Rep_3363_c_41_7
Type: CAZyme
Location: 17821 - 19341 (-)
Gene ID: Rep_3363_c_41_8
Type: TF
Location: 19510 - 20544 (-)
Gene ID: Rep_3363_c_41_9
Type: CAZyme
Location: 20846 - 22927 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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