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Cluster: Rep_3363_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3363_c_37 Rep_3363_c_37_13 14437 15930 - GH51_1
TF Rep_3363_c_37 Rep_3363_c_37_14 15946 16863 - HTH_AraC | HTH_AraC
TC Rep_3363_c_37 Rep_3363_c_37_15 17196 18155 + 3.A.1.1.11
TC Rep_3363_c_37 Rep_3363_c_37_16 18148 19011 + 3.A.1.1.41
STP Rep_3363_c_37 Rep_3363_c_37_17 19083 20420 + SBP_bac_1
CAZyme Rep_3363_c_37 Rep_3363_c_37_18 20519 23182 + CBM67 | GH78
Gene ID: Rep_3363_c_37_13
Type: CAZyme
Location: 14437 - 15930 (-)
Gene ID: Rep_3363_c_37_14
Type: TF
Location: 15946 - 16863 (-)
Gene ID: Rep_3363_c_37_15
Type: TC
Location: 17196 - 18155 (+)
Gene ID: Rep_3363_c_37_16
Type: TC
Location: 18148 - 19011 (+)
Gene ID: Rep_3363_c_37_17
Type: STP
Location: 19083 - 20420 (+)
Gene ID: Rep_3363_c_37_18
Type: CAZyme
Location: 20519 - 23182 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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