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Cluster: Rep_3363_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3363_c_34 Rep_3363_c_34_9 9146 9460 - CBM50 | CBM50
pfam Rep_3363_c_34 Rep_3363_c_34_10 9659 11053 + tRNA-synt_2 | tRNA_anti-codon
pfam Rep_3363_c_34 Rep_3363_c_34_11 11242 12525 + Asp_aminotransf
TC Rep_3363_c_34 Rep_3363_c_34_12 12798 14204 + 2.A.6.4.2
TC Rep_3363_c_34 Rep_3363_c_34_13 14201 15163 + 2.A.6.4.2
pfam Rep_3363_c_34 Rep_3363_c_34_14 15243 16043 + AP_endonuc_2
pfam Rep_3363_c_34 Rep_3363_c_34_15 16143 16601 + ATP-cone | Zn_ribbon_NrdR
CAZyme Rep_3363_c_34 Rep_3363_c_34_16 16703 17470 + CE4
Gene ID: Rep_3363_c_34_9
Type: CAZyme
Location: 9146 - 9460 (-)
Gene ID: Rep_3363_c_34_10
Type: pfam
Location: 9659 - 11053 (+)
Gene ID: Rep_3363_c_34_11
Type: pfam
Location: 11242 - 12525 (+)
Gene ID: Rep_3363_c_34_12
Type: TC
Location: 12798 - 14204 (+)
Gene ID: Rep_3363_c_34_13
Type: TC
Location: 14201 - 15163 (+)
Gene ID: Rep_3363_c_34_14
Type: pfam
Location: 15243 - 16043 (+)
Gene ID: Rep_3363_c_34_15
Type: pfam
Location: 16143 - 16601 (+)
Gene ID: Rep_3363_c_34_16
Type: CAZyme
Location: 16703 - 17470 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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