dbCAN Logo

Cluster: Rep_3363_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3363_c_29 Rep_3363_c_29_9 9893 11869 - GH127
TC Rep_3363_c_29 Rep_3363_c_29_10 12018 13742 - 8.A.59.2.1
TF Rep_3363_c_29 Rep_3363_c_29_11 13802 15307 - HTH_AraC | HTH_AraC
TC Rep_3363_c_29 Rep_3363_c_29_12 15396 16271 - 3.A.1.1.32
TC Rep_3363_c_29 Rep_3363_c_29_13 16307 17656 - 3.A.1.1.20
TC Rep_3363_c_29 Rep_3363_c_29_14 17892 18722 + 3.A.1.1.47
CAZyme Rep_3363_c_29 Rep_3363_c_29_15 18761 20287 + GH51_1
CAZyme Rep_3363_c_29 Rep_3363_c_29_16 20546 21691 + GH109
CAZyme Rep_3363_c_29 Rep_3363_c_29_17 21915 24077 - GH65
CAZyme Rep_3363_c_29 Rep_3363_c_29_18 24094 26127 - GH35
Gene ID: Rep_3363_c_29_9
Type: CAZyme
Location: 9893 - 11869 (-)
Gene ID: Rep_3363_c_29_10
Type: TC
Location: 12018 - 13742 (-)
Gene ID: Rep_3363_c_29_11
Type: TF
Location: 13802 - 15307 (-)
Gene ID: Rep_3363_c_29_12
Type: TC
Location: 15396 - 16271 (-)
Gene ID: Rep_3363_c_29_13
Type: TC
Location: 16307 - 17656 (-)
Gene ID: Rep_3363_c_29_14
Type: TC
Location: 17892 - 18722 (+)
Gene ID: Rep_3363_c_29_15
Type: CAZyme
Location: 18761 - 20287 (+)
Gene ID: Rep_3363_c_29_16
Type: CAZyme
Location: 20546 - 21691 (+)
Gene ID: Rep_3363_c_29_17
Type: CAZyme
Location: 21915 - 24077 (-)
Gene ID: Rep_3363_c_29_18
Type: CAZyme
Location: 24094 - 26127 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List