Cluster: Rep_3363_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3363
- CGC Family ID: CGCFAM_00163
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3363_c_0 | Rep_3363_c_0_123 | 115685 | 116503 | + | CE4 |
| TC | Rep_3363_c_0 | Rep_3363_c_0_124 | 116749 | 117519 | + | 3.A.1.3.15 |
| TC | Rep_3363_c_0 | Rep_3363_c_0_125 | 117541 | 118275 | + | 3.A.1.3.15 |
| TC | Rep_3363_c_0 | Rep_3363_c_0_126 | 118262 | 118984 | + | 3.A.1.3.15 |
| pfam | Rep_3363_c_0 | Rep_3363_c_0_127 | 119035 | 120609 | - | RACo_C_ter | Raco_middle |
| TC | Rep_3363_c_0 | Rep_3363_c_0_128 | 120834 | 122183 | + | 2.A.66.1.33 |
Gene ID: Rep_3363_c_0_123
Type: CAZyme
Location: 115685 - 116503 (+)
Type: CAZyme
Location: 115685 - 116503 (+)
Gene ID: Rep_3363_c_0_124
Type: TC
Location: 116749 - 117519 (+)
Type: TC
Location: 116749 - 117519 (+)
Gene ID: Rep_3363_c_0_125
Type: TC
Location: 117541 - 118275 (+)
Type: TC
Location: 117541 - 118275 (+)
Gene ID: Rep_3363_c_0_126
Type: TC
Location: 118262 - 118984 (+)
Type: TC
Location: 118262 - 118984 (+)
Gene ID: Rep_3363_c_0_127
Type: pfam
Location: 119035 - 120609 (-)
Type: pfam
Location: 119035 - 120609 (-)
Gene ID: Rep_3363_c_0_128
Type: TC
Location: 120834 - 122183 (+)
Type: TC
Location: 120834 - 122183 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A sp902490005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.