dbCAN Logo

Cluster: Rep_3363_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3363_c_22 Rep_3363_c_22_8 6911 8398 - GH51_1
pfam Rep_3363_c_22 Rep_3363_c_22_9 8459 9412 - IU_nuc_hydro
TF Rep_3363_c_22 Rep_3363_c_22_10 9465 10499 - LacI
CAZyme Rep_3363_c_22 Rep_3363_c_22_11 10906 12414 - GH51_1
CAZyme Rep_3363_c_22 Rep_3363_c_22_12 12979 14490 + GH51_1
TC Rep_3363_c_22 Rep_3363_c_22_13 14508 15824 + 3.A.1.1.3
TC Rep_3363_c_22 Rep_3363_c_22_14 15913 16803 + 3.A.1.1.20
TC Rep_3363_c_22 Rep_3363_c_22_15 16819 17655 + 3.A.1.1.34
CAZyme Rep_3363_c_22 Rep_3363_c_22_16 17675 18631 + GH105
CAZyme Rep_3363_c_22 Rep_3363_c_22_17 18636 19610 + GH5
TC Rep_3363_c_22 Rep_3363_c_22_18 19664 20638 + 8.A.5.1.3
CAZyme Rep_3363_c_22 Rep_3363_c_22_19 20762 23026 + GH95
CAZyme Rep_3363_c_22 Rep_3363_c_22_20 23092 24876 + GH43_27
sulfatase Rep_3363_c_22 Rep_3363_c_22_21 25263 27032 - S1_22
TC Rep_3363_c_22 Rep_3363_c_22_22 27515 28834 + 3.A.1.1.45
TC Rep_3363_c_22 Rep_3363_c_22_23 28878 29759 + 3.A.1.1.37
TC Rep_3363_c_22 Rep_3363_c_22_24 29759 30625 + 3.A.1.1.45
TF Rep_3363_c_22 Rep_3363_c_22_25 30755 31732 + LacI
CAZyme Rep_3363_c_22 Rep_3363_c_22_26 31764 33965 + GH36
TC Rep_3363_c_22 Rep_3363_c_22_27 34351 35682 + 2.A.66.1.26
Gene ID: Rep_3363_c_22_8
Type: CAZyme
Location: 6911 - 8398 (-)
Gene ID: Rep_3363_c_22_9
Type: pfam
Location: 8459 - 9412 (-)
Gene ID: Rep_3363_c_22_10
Type: TF
Location: 9465 - 10499 (-)
Gene ID: Rep_3363_c_22_11
Type: CAZyme
Location: 10906 - 12414 (-)
Gene ID: Rep_3363_c_22_12
Type: CAZyme
Location: 12979 - 14490 (+)
Gene ID: Rep_3363_c_22_13
Type: TC
Location: 14508 - 15824 (+)
Gene ID: Rep_3363_c_22_14
Type: TC
Location: 15913 - 16803 (+)
Gene ID: Rep_3363_c_22_15
Type: TC
Location: 16819 - 17655 (+)
Gene ID: Rep_3363_c_22_16
Type: CAZyme
Location: 17675 - 18631 (+)
Gene ID: Rep_3363_c_22_17
Type: CAZyme
Location: 18636 - 19610 (+)
Gene ID: Rep_3363_c_22_18
Type: TC
Location: 19664 - 20638 (+)
Gene ID: Rep_3363_c_22_19
Type: CAZyme
Location: 20762 - 23026 (+)
Gene ID: Rep_3363_c_22_20
Type: CAZyme
Location: 23092 - 24876 (+)
Gene ID: Rep_3363_c_22_21
Type: sulfatase
Location: 25263 - 27032 (-)
Gene ID: Rep_3363_c_22_22
Type: TC
Location: 27515 - 28834 (+)
Gene ID: Rep_3363_c_22_23
Type: TC
Location: 28878 - 29759 (+)
Gene ID: Rep_3363_c_22_24
Type: TC
Location: 29759 - 30625 (+)
Gene ID: Rep_3363_c_22_25
Type: TF
Location: 30755 - 31732 (+)
Gene ID: Rep_3363_c_22_26
Type: CAZyme
Location: 31764 - 33965 (+)
Gene ID: Rep_3363_c_22_27
Type: TC
Location: 34351 - 35682 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List