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Cluster: Rep_3363_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3363_c_17 Rep_3363_c_17_43 40675 42069 - 2.A.66.1.32
pfam Rep_3363_c_17 Rep_3363_c_17_44 42262 42786 - CarD_TRCF_RID
CAZyme Rep_3363_c_17 Rep_3363_c_17_45 43163 45094 - GH127
STP Rep_3363_c_17 Rep_3363_c_17_46 45045 46436 - SBP_bac_1
CAZyme Rep_3363_c_17 Rep_3363_c_17_47 46452 48323 - GH146
CAZyme Rep_3363_c_17 Rep_3363_c_17_48 48336 50366 - GH127
TC Rep_3363_c_17 Rep_3363_c_17_49 50379 51218 - 3.A.1.1.11
TC Rep_3363_c_17 Rep_3363_c_17_50 51232 51993 - 3.A.1.1.11
Gene ID: Rep_3363_c_17_43
Type: TC
Location: 40675 - 42069 (-)
Gene ID: Rep_3363_c_17_44
Type: pfam
Location: 42262 - 42786 (-)
Gene ID: Rep_3363_c_17_45
Type: CAZyme
Location: 43163 - 45094 (-)
Gene ID: Rep_3363_c_17_46
Type: STP
Location: 45045 - 46436 (-)
Gene ID: Rep_3363_c_17_47
Type: CAZyme
Location: 46452 - 48323 (-)
Gene ID: Rep_3363_c_17_48
Type: CAZyme
Location: 48336 - 50366 (-)
Gene ID: Rep_3363_c_17_49
Type: TC
Location: 50379 - 51218 (-)
Gene ID: Rep_3363_c_17_50
Type: TC
Location: 51232 - 51993 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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