dbCAN Logo

Cluster: Rep_3363_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3363_c_10 Rep_3363_c_10_46 48713 49234 + 2.A.87.3.2
TC Rep_3363_c_10 Rep_3363_c_10_47 49251 50585 + 3.D.6.1.2
TC Rep_3363_c_10 Rep_3363_c_10_48 50591 51550 + 3.D.6.1.2
TC Rep_3363_c_10 Rep_3363_c_10_49 51531 52091 + 3.D.6.1.2
TC Rep_3363_c_10 Rep_3363_c_10_50 52093 52776 + 3.D.6.1.2
TC Rep_3363_c_10 Rep_3363_c_10_51 52773 53381 + 3.D.6.1.2
TC Rep_3363_c_10 Rep_3363_c_10_52 53400 54212 + 3.D.6.1.2
pfam Rep_3363_c_10 Rep_3363_c_10_53 54377 55054 - LUD_dom
pfam Rep_3363_c_10 Rep_3363_c_10_54 55222 55962 - Amidase_3 | SH3_4 | SH3_3
CAZyme Rep_3363_c_10 Rep_3363_c_10_55 55990 56871 - CE4
Gene ID: Rep_3363_c_10_46
Type: TC
Location: 48713 - 49234 (+)
Gene ID: Rep_3363_c_10_47
Type: TC
Location: 49251 - 50585 (+)
Gene ID: Rep_3363_c_10_48
Type: TC
Location: 50591 - 51550 (+)
Gene ID: Rep_3363_c_10_49
Type: TC
Location: 51531 - 52091 (+)
Gene ID: Rep_3363_c_10_50
Type: TC
Location: 52093 - 52776 (+)
Gene ID: Rep_3363_c_10_51
Type: TC
Location: 52773 - 53381 (+)
Gene ID: Rep_3363_c_10_52
Type: TC
Location: 53400 - 54212 (+)
Gene ID: Rep_3363_c_10_53
Type: pfam
Location: 54377 - 55054 (-)
Gene ID: Rep_3363_c_10_54
Type: pfam
Location: 55222 - 55962 (-)
Gene ID: Rep_3363_c_10_55
Type: CAZyme
Location: 55990 - 56871 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List