Cluster: Rep_3363_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3363
- CGC Family ID: CGCFAM_07507
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3363_c_0 | Rep_3363_c_0_97 | 90670 | 92523 | + | 3.A.3.6.10 |
| CAZyme | Rep_3363_c_0 | Rep_3363_c_0_98 | 92583 | 94142 | - | GH13_44 |
| TF | Rep_3363_c_0 | Rep_3363_c_0_99 | 94265 | 95146 | + | HTH_AraC | HTH_AraC |
| pfam | Rep_3363_c_0 | Rep_3363_c_0_100 | 95248 | 96012 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | Rep_3363_c_0 | Rep_3363_c_0_101 | 96012 | 96917 | - | 3.A.1.131.1 |
Gene ID: Rep_3363_c_0_97
Type: TC
Location: 90670 - 92523 (+)
Type: TC
Location: 90670 - 92523 (+)
Gene ID: Rep_3363_c_0_98
Type: CAZyme
Location: 92583 - 94142 (-)
Type: CAZyme
Location: 92583 - 94142 (-)
Gene ID: Rep_3363_c_0_99
Type: TF
Location: 94265 - 95146 (+)
Type: TF
Location: 94265 - 95146 (+)
Gene ID: Rep_3363_c_0_100
Type: pfam
Location: 95248 - 96012 (-)
Type: pfam
Location: 95248 - 96012 (-)
Gene ID: Rep_3363_c_0_101
Type: TC
Location: 96012 - 96917 (-)
Type: TC
Location: 96012 - 96917 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A sp902490005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.