Cluster: Rep_3363_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3363
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3363_c_9 | Rep_3363_c_9_42 | 50700 | 52790 | + | GH36 |
| pfam | Rep_3363_c_9 | Rep_3363_c_9_43 | 54238 | 55326 | - | GFO_IDH_MocA |
| CAZyme | Rep_3363_c_9 | Rep_3363_c_9_44 | 55371 | 56441 | - | GH109 |
| TC | Rep_3363_c_9 | Rep_3363_c_9_45 | 56829 | 58166 | + | 3.A.1.1.41 |
| TC | Rep_3363_c_9 | Rep_3363_c_9_46 | 58413 | 59312 | + | 3.A.1.1.7 |
| TC | Rep_3363_c_9 | Rep_3363_c_9_47 | 59332 | 60171 | + | 3.A.1.1.41 |
| CAZyme | Rep_3363_c_9 | Rep_3363_c_9_48 | 60206 | 61666 | + | GH32 |
Gene ID: Rep_3363_c_9_42
Type: CAZyme
Location: 50700 - 52790 (+)
Type: CAZyme
Location: 50700 - 52790 (+)
Gene ID: Rep_3363_c_9_43
Type: pfam
Location: 54238 - 55326 (-)
Type: pfam
Location: 54238 - 55326 (-)
Gene ID: Rep_3363_c_9_44
Type: CAZyme
Location: 55371 - 56441 (-)
Type: CAZyme
Location: 55371 - 56441 (-)
Gene ID: Rep_3363_c_9_45
Type: TC
Location: 56829 - 58166 (+)
Type: TC
Location: 56829 - 58166 (+)
Gene ID: Rep_3363_c_9_46
Type: TC
Location: 58413 - 59312 (+)
Type: TC
Location: 58413 - 59312 (+)
Gene ID: Rep_3363_c_9_47
Type: TC
Location: 59332 - 60171 (+)
Type: TC
Location: 59332 - 60171 (+)
Gene ID: Rep_3363_c_9_48
Type: CAZyme
Location: 60206 - 61666 (+)
Type: CAZyme
Location: 60206 - 61666 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A sp902490005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.