Cluster: Rep_3363_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3363
- CGC Family ID: CGCFAM_02640
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3363_c_8 | Rep_3363_c_8_3 | 4407 | 6821 | - | GH116 |
| TC | Rep_3363_c_8 | Rep_3363_c_8_4 | 6846 | 7697 | - | 3.A.1.1.39 |
| TC | Rep_3363_c_8 | Rep_3363_c_8_5 | 7715 | 8617 | - | 3.A.1.1.20 |
| STP | Rep_3363_c_8 | Rep_3363_c_8_6 | 8753 | 10105 | - | SBP_bac_1 |
| TF | Rep_3363_c_8 | Rep_3363_c_8_7 | 10411 | 11202 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_3363_c_8 | Rep_3363_c_8_8 | 11632 | 12798 | + | GH179 |
Gene ID: Rep_3363_c_8_3
Type: CAZyme
Location: 4407 - 6821 (-)
Type: CAZyme
Location: 4407 - 6821 (-)
Gene ID: Rep_3363_c_8_4
Type: TC
Location: 6846 - 7697 (-)
Type: TC
Location: 6846 - 7697 (-)
Gene ID: Rep_3363_c_8_5
Type: TC
Location: 7715 - 8617 (-)
Type: TC
Location: 7715 - 8617 (-)
Gene ID: Rep_3363_c_8_6
Type: STP
Location: 8753 - 10105 (-)
Type: STP
Location: 8753 - 10105 (-)
Gene ID: Rep_3363_c_8_7
Type: TF
Location: 10411 - 11202 (+)
Type: TF
Location: 10411 - 11202 (+)
Gene ID: Rep_3363_c_8_8
Type: CAZyme
Location: 11632 - 12798 (+)
Type: CAZyme
Location: 11632 - 12798 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A sp902490005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.