Cluster: Rep_3363_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3363
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3363_c_5 | Rep_3363_c_5_72 | 83580 | 84512 | + | 3.A.1.1.25 |
| TC | Rep_3363_c_5 | Rep_3363_c_5_73 | 84525 | 85418 | + | 3.A.1.1.29 |
| pfam | Rep_3363_c_5 | Rep_3363_c_5_74 | 85481 | 86647 | + | MFS_1 | MFS_1 |
| CAZyme | Rep_3363_c_5 | Rep_3363_c_5_75 | 86690 | 88444 | + | GH63 |
| CAZyme | Rep_3363_c_5 | Rep_3363_c_5_76 | 88511 | 89644 | + | GH109 |
Gene ID: Rep_3363_c_5_72
Type: TC
Location: 83580 - 84512 (+)
Type: TC
Location: 83580 - 84512 (+)
Gene ID: Rep_3363_c_5_73
Type: TC
Location: 84525 - 85418 (+)
Type: TC
Location: 84525 - 85418 (+)
Gene ID: Rep_3363_c_5_74
Type: pfam
Location: 85481 - 86647 (+)
Type: pfam
Location: 85481 - 86647 (+)
Gene ID: Rep_3363_c_5_75
Type: CAZyme
Location: 86690 - 88444 (+)
Type: CAZyme
Location: 86690 - 88444 (+)
Gene ID: Rep_3363_c_5_76
Type: CAZyme
Location: 88511 - 89644 (+)
Type: CAZyme
Location: 88511 - 89644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A sp902490005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.