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Cluster: Rep_3363_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3363_c_5 Rep_3363_c_5_33 43937 45301 + 3.A.1.1.5
TC Rep_3363_c_5 Rep_3363_c_5_34 45336 46271 + 3.A.1.1.4
TC Rep_3363_c_5 Rep_3363_c_5_35 46277 47110 + 3.A.1.1.36
CAZyme Rep_3363_c_5 Rep_3363_c_5_36 47133 48221 + GH172
TC Rep_3363_c_5 Rep_3363_c_5_37 48551 48889 - 2.A.78.1.1
TC Rep_3363_c_5 Rep_3363_c_5_38 48886 49584 - 2.A.78.1.1
TC Rep_3363_c_5 Rep_3363_c_5_39 49603 50892 - 9.A.40.2.2
Gene ID: Rep_3363_c_5_33
Type: TC
Location: 43937 - 45301 (+)
Gene ID: Rep_3363_c_5_34
Type: TC
Location: 45336 - 46271 (+)
Gene ID: Rep_3363_c_5_35
Type: TC
Location: 46277 - 47110 (+)
Gene ID: Rep_3363_c_5_36
Type: CAZyme
Location: 47133 - 48221 (+)
Gene ID: Rep_3363_c_5_37
Type: TC
Location: 48551 - 48889 (-)
Gene ID: Rep_3363_c_5_38
Type: TC
Location: 48886 - 49584 (-)
Gene ID: Rep_3363_c_5_39
Type: TC
Location: 49603 - 50892 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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