Cluster: Rep_3363_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3363
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3363_c_2 | Rep_3363_c_2_82 | 101956 | 102936 | - | GT4 |
| CAZyme | Rep_3363_c_2 | Rep_3363_c_2_83 | 103099 | 104064 | - | GT2 |
| TC | Rep_3363_c_2 | Rep_3363_c_2_84 | 104452 | 108297 | - | 9.B.34.1.4 |
| STP | Rep_3363_c_2 | Rep_3363_c_2_85 | 108437 | 109018 | - | TetR_N |
| pfam | Rep_3363_c_2 | Rep_3363_c_2_86 | 109320 | 109898 | + | DUF308 | DUF308 | DUF308 |
| TC | Rep_3363_c_2 | Rep_3363_c_2_87 | 109948 | 112029 | + | 2.A.6.5.1 |
| TC | Rep_3363_c_2 | Rep_3363_c_2_88 | 112076 | 114163 | + | 9.B.74.1.4 |
Gene ID: Rep_3363_c_2_82
Type: CAZyme
Location: 101956 - 102936 (-)
Type: CAZyme
Location: 101956 - 102936 (-)
Gene ID: Rep_3363_c_2_83
Type: CAZyme
Location: 103099 - 104064 (-)
Type: CAZyme
Location: 103099 - 104064 (-)
Gene ID: Rep_3363_c_2_84
Type: TC
Location: 104452 - 108297 (-)
Type: TC
Location: 104452 - 108297 (-)
Gene ID: Rep_3363_c_2_85
Type: STP
Location: 108437 - 109018 (-)
Type: STP
Location: 108437 - 109018 (-)
Gene ID: Rep_3363_c_2_86
Type: pfam
Location: 109320 - 109898 (+)
Type: pfam
Location: 109320 - 109898 (+)
Gene ID: Rep_3363_c_2_87
Type: TC
Location: 109948 - 112029 (+)
Type: TC
Location: 109948 - 112029 (+)
Gene ID: Rep_3363_c_2_88
Type: TC
Location: 112076 - 114163 (+)
Type: TC
Location: 112076 - 114163 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A sp902490005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.