Cluster: Rep_3363_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3363
- CGC Family ID: CGCFAM_04952
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3363_c_2 | Rep_3363_c_2_41 | 47704 | 49773 | - | 8.A.59.4.1 |
| pfam | Rep_3363_c_2 | Rep_3363_c_2_42 | 50223 | 51110 | - | AP_endonuc_2 |
| CAZyme | Rep_3363_c_2 | Rep_3363_c_2_43 | 51204 | 52403 | - | GH179 |
| TC | Rep_3363_c_2 | Rep_3363_c_2_44 | 52712 | 53965 | + | 2.A.86.1.8 |
| peptidase | Rep_3363_c_2 | Rep_3363_c_2_45 | 54008 | 54913 | - | S12.UPW |
| TC | Rep_3363_c_2 | Rep_3363_c_2_46 | 54996 | 56372 | - | 2.A.66.1.41 |
Gene ID: Rep_3363_c_2_41
Type: TC
Location: 47704 - 49773 (-)
Type: TC
Location: 47704 - 49773 (-)
Gene ID: Rep_3363_c_2_42
Type: pfam
Location: 50223 - 51110 (-)
Type: pfam
Location: 50223 - 51110 (-)
Gene ID: Rep_3363_c_2_43
Type: CAZyme
Location: 51204 - 52403 (-)
Type: CAZyme
Location: 51204 - 52403 (-)
Gene ID: Rep_3363_c_2_44
Type: TC
Location: 52712 - 53965 (+)
Type: TC
Location: 52712 - 53965 (+)
Gene ID: Rep_3363_c_2_45
Type: peptidase
Location: 54008 - 54913 (-)
Type: peptidase
Location: 54008 - 54913 (-)
Gene ID: Rep_3363_c_2_46
Type: TC
Location: 54996 - 56372 (-)
Type: TC
Location: 54996 - 56372 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A sp902490005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.