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Cluster: Rep_3363_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3363_c_2 Rep_3363_c_2_21 22455 23588 - GH179
pfam Rep_3363_c_2 Rep_3363_c_2_22 23907 24782 - AP_endonuc_2
STP Rep_3363_c_2 Rep_3363_c_2_23 24868 26241 - SBP_bac_1
TC Rep_3363_c_2 Rep_3363_c_2_24 26411 27244 - 3.A.1.1.41
TC Rep_3363_c_2 Rep_3363_c_2_25 27258 28148 - 3.A.1.1.44
STP Rep_3363_c_2 Rep_3363_c_2_26 28817 29968 + Pribosyltran
TC Rep_3363_c_2 Rep_3363_c_2_27 30159 31043 + 3.A.1.3.16
TC Rep_3363_c_2 Rep_3363_c_2_28 31083 31724 + 3.A.1.3.20
TC Rep_3363_c_2 Rep_3363_c_2_29 31738 32502 + 3.A.1.3.24
pfam Rep_3363_c_2 Rep_3363_c_2_30 32589 33797 - Fe_hyd_lg_C
pfam Rep_3363_c_2 Rep_3363_c_2_31 33933 34424 - Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10
TC Rep_3363_c_2 Rep_3363_c_2_32 34581 35285 + 3.A.1.122.7
Gene ID: Rep_3363_c_2_21
Type: CAZyme
Location: 22455 - 23588 (-)
Gene ID: Rep_3363_c_2_22
Type: pfam
Location: 23907 - 24782 (-)
Gene ID: Rep_3363_c_2_23
Type: STP
Location: 24868 - 26241 (-)
Gene ID: Rep_3363_c_2_24
Type: TC
Location: 26411 - 27244 (-)
Gene ID: Rep_3363_c_2_25
Type: TC
Location: 27258 - 28148 (-)
Gene ID: Rep_3363_c_2_26
Type: STP
Location: 28817 - 29968 (+)
Gene ID: Rep_3363_c_2_27
Type: TC
Location: 30159 - 31043 (+)
Gene ID: Rep_3363_c_2_28
Type: TC
Location: 31083 - 31724 (+)
Gene ID: Rep_3363_c_2_29
Type: TC
Location: 31738 - 32502 (+)
Gene ID: Rep_3363_c_2_30
Type: pfam
Location: 32589 - 33797 (-)
Gene ID: Rep_3363_c_2_31
Type: pfam
Location: 33933 - 34424 (-)
Gene ID: Rep_3363_c_2_32
Type: TC
Location: 34581 - 35285 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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