Cluster: Rep_3362_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3362
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3362_c_20 | Rep_3362_c_20_22 | 17894 | 18418 | + | 9.A.11.1.1 |
| TC | Rep_3362_c_20 | Rep_3362_c_20_23 | 18856 | 19878 | + | 9.A.11.1.1 |
| CAZyme | Rep_3362_c_20 | Rep_3362_c_20_24 | 20061 | 21050 | + | GH10 |
| CAZyme | Rep_3362_c_20 | Rep_3362_c_20_25 | 21076 | 22605 | + | GH39 |
| pfam | Rep_3362_c_20 | Rep_3362_c_20_26 | 22706 | 24235 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | Rep_3362_c_20 | Rep_3362_c_20_27 | 24498 | 24971 | + | 3.A.1.122.7 |
Gene ID: Rep_3362_c_20_22
Type: TC
Location: 17894 - 18418 (+)
Type: TC
Location: 17894 - 18418 (+)
Gene ID: Rep_3362_c_20_23
Type: TC
Location: 18856 - 19878 (+)
Type: TC
Location: 18856 - 19878 (+)
Gene ID: Rep_3362_c_20_24
Type: CAZyme
Location: 20061 - 21050 (+)
Type: CAZyme
Location: 20061 - 21050 (+)
Gene ID: Rep_3362_c_20_25
Type: CAZyme
Location: 21076 - 22605 (+)
Type: CAZyme
Location: 21076 - 22605 (+)
Gene ID: Rep_3362_c_20_26
Type: pfam
Location: 22706 - 24235 (-)
Type: pfam
Location: 22706 - 24235 (-)
Gene ID: Rep_3362_c_20_27
Type: TC
Location: 24498 - 24971 (+)
Type: TC
Location: 24498 - 24971 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1264
Species
UMGS1264 sp904399395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.