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Cluster: Rep_3362_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3362_c_205 Rep_3362_c_205_1 59 763 + 3.A.1.128.3
pfam Rep_3362_c_205 Rep_3362_c_205_2 760 2373 + ABC_export
pfam Rep_3362_c_205 Rep_3362_c_205_3 2512 3450 + F_bP_aldolase
CAZyme Rep_3362_c_205 Rep_3362_c_205_4 3688 5793 - GH51_1
Gene ID: Rep_3362_c_205_1
Type: TC
Location: 59 - 763 (+)
Gene ID: Rep_3362_c_205_2
Type: pfam
Location: 760 - 2373 (+)
Gene ID: Rep_3362_c_205_3
Type: pfam
Location: 2512 - 3450 (+)
Gene ID: Rep_3362_c_205_4
Type: CAZyme
Location: 3688 - 5793 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_3362_c_205_3 vegetarian > vegan 1.02717 0.00701

🧭 Explore Read Mapping of CGC

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