Cluster: Rep_3362_CGC46
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3362
- CGC Family ID: CGCFAM_04431
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3362_c_180 | Rep_3362_c_180_3 | 972 | 2951 | - | GH31_7 |
| TC | Rep_3362_c_180 | Rep_3362_c_180_4 | 2958 | 3818 | - | 3.A.1.1.34 |
| TC | Rep_3362_c_180 | Rep_3362_c_180_5 | 3811 | 4731 | - | 3.A.1.1.11 |
| TC | Rep_3362_c_180 | Rep_3362_c_180_6 | 4793 | 6121 | - | 3.A.1.1.7 |
Gene ID: Rep_3362_c_180_3
Type: CAZyme
Location: 972 - 2951 (-)
Type: CAZyme
Location: 972 - 2951 (-)
Gene ID: Rep_3362_c_180_4
Type: TC
Location: 2958 - 3818 (-)
Type: TC
Location: 2958 - 3818 (-)
Gene ID: Rep_3362_c_180_5
Type: TC
Location: 3811 - 4731 (-)
Type: TC
Location: 3811 - 4731 (-)
Gene ID: Rep_3362_c_180_6
Type: TC
Location: 4793 - 6121 (-)
Type: TC
Location: 4793 - 6121 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1264
Species
UMGS1264 sp904399395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3362_c_180_3 | vegan > omnivore | 1.28792 | 0.02637 |
| Rep_3362_c_180_3 | vegetarian > omnivore | 1.25518 | 0.02677 |
| Rep_3362_c_180_4 | vegan > omnivore | 1.71728 | 0.02637 |
| Rep_3362_c_180_4 | vegetarian > omnivore | 1.40197 | 0.02677 |
| Rep_3362_c_180_5 | vegan > omnivore | 1.35009 | 0.02637 |
| Rep_3362_c_180_5 | vegetarian > omnivore | 1.23086 | 0.02677 |
| Rep_3362_c_180_6 | vegan > omnivore | 1.15804 | 0.02637 |
| Rep_3362_c_180_6 | vegetarian > omnivore | 1.11089 | 0.02677 |