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Cluster: Rep_3362_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3362_c_121 Rep_3362_c_121_1 55 1071 - GH177
pfam Rep_3362_c_121 Rep_3362_c_121_2 1603 2082 + LacAB_rpiB
NULL(UNKNOWN) Rep_3362_c_121 Rep_3362_c_121_3 2087 2254 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3362_c_121 Rep_3362_c_121_4 2377 3114 + 2.A.78.1.1
TC Rep_3362_c_121 Rep_3362_c_121_5 3111 3437 + 2.A.78.1.1
pfam Rep_3362_c_121 Rep_3362_c_121_6 3538 4128 - Hexapep | Mac | Hexapep_2
CAZyme Rep_3362_c_121 Rep_3362_c_121_7 4353 5042 - GH78
CAZyme Rep_3362_c_121 Rep_3362_c_121_8 5054 6499 - CBM67 | GH78
Gene ID: Rep_3362_c_121_1
Type: CAZyme
Location: 55 - 1071 (-)
Gene ID: Rep_3362_c_121_2
Type: pfam
Location: 1603 - 2082 (+)
Gene ID: Rep_3362_c_121_3
Type:
Location: 2087 - 2254 (+)
Gene ID: Rep_3362_c_121_4
Type: TC
Location: 2377 - 3114 (+)
Gene ID: Rep_3362_c_121_5
Type: TC
Location: 3111 - 3437 (+)
Gene ID: Rep_3362_c_121_6
Type: pfam
Location: 3538 - 4128 (-)
Gene ID: Rep_3362_c_121_7
Type: CAZyme
Location: 4353 - 5042 (-)
Gene ID: Rep_3362_c_121_8
Type: CAZyme
Location: 5054 - 6499 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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