Cluster: Rep_3362_CGC29
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3362
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3362_c_77 | Rep_3362_c_77_6 | 2717 | 4696 | - | GH13_39 |
| pfam | Rep_3362_c_77 | Rep_3362_c_77_7 | 5121 | 6005 | + | DegV |
| TF | Rep_3362_c_77 | Rep_3362_c_77_8 | 6861 | 8216 | + | HTH_3 |
| CAZyme | Rep_3362_c_77 | Rep_3362_c_77_9 | 8300 | 9724 | - | GH30 |
| pfam | Rep_3362_c_77 | Rep_3362_c_77_10 | 9748 | 10506 | - | Amidohydro_2 |
| TC | Rep_3362_c_77 | Rep_3362_c_77_11 | 10519 | 12180 | - | 3.A.1.1.9 |
| TC | Rep_3362_c_77 | Rep_3362_c_77_12 | 12297 | 13169 | - | 3.A.1.1.29 |
| TC | Rep_3362_c_77 | Rep_3362_c_77_13 | 13183 | 14133 | - | 3.A.1.1.29 |
Gene ID: Rep_3362_c_77_6
Type: CAZyme
Location: 2717 - 4696 (-)
Type: CAZyme
Location: 2717 - 4696 (-)
Gene ID: Rep_3362_c_77_7
Type: pfam
Location: 5121 - 6005 (+)
Type: pfam
Location: 5121 - 6005 (+)
Gene ID: Rep_3362_c_77_8
Type: TF
Location: 6861 - 8216 (+)
Type: TF
Location: 6861 - 8216 (+)
Gene ID: Rep_3362_c_77_9
Type: CAZyme
Location: 8300 - 9724 (-)
Type: CAZyme
Location: 8300 - 9724 (-)
Gene ID: Rep_3362_c_77_10
Type: pfam
Location: 9748 - 10506 (-)
Type: pfam
Location: 9748 - 10506 (-)
Gene ID: Rep_3362_c_77_11
Type: TC
Location: 10519 - 12180 (-)
Type: TC
Location: 10519 - 12180 (-)
Gene ID: Rep_3362_c_77_12
Type: TC
Location: 12297 - 13169 (-)
Type: TC
Location: 12297 - 13169 (-)
Gene ID: Rep_3362_c_77_13
Type: TC
Location: 13183 - 14133 (-)
Type: TC
Location: 13183 - 14133 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1264
Species
UMGS1264 sp904399395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.