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Cluster: Rep_3362_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3362_c_57 Rep_3362_c_57_10 11837 12883 + 3.A.1.1.10
TC Rep_3362_c_57 Rep_3362_c_57_11 12915 13808 + 3.A.1.1.10
STP Rep_3362_c_57 Rep_3362_c_57_12 13881 15554 + SBP_bac_1
CAZyme Rep_3362_c_57 Rep_3362_c_57_13 15851 16867 + GH5_13
Gene ID: Rep_3362_c_57_10
Type: TC
Location: 11837 - 12883 (+)
Gene ID: Rep_3362_c_57_11
Type: TC
Location: 12915 - 13808 (+)
Gene ID: Rep_3362_c_57_12
Type: STP
Location: 13881 - 15554 (+)
Gene ID: Rep_3362_c_57_13
Type: CAZyme
Location: 15851 - 16867 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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