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Cluster: Rep_3362_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3362_c_51 Rep_3362_c_51_6 4981 5748 + 3.A.1.134.4
TC Rep_3362_c_51 Rep_3362_c_51_7 5741 7738 + 3.A.1.134.4
TC Rep_3362_c_51 Rep_3362_c_51_8 8007 8900 + 3.A.1.3.10
TC Rep_3362_c_51 Rep_3362_c_51_9 9086 9763 + 3.A.1.3.6
TC Rep_3362_c_51 Rep_3362_c_51_10 9777 10547 + 3.A.1.3.24
NULL(UNKNOWN) Rep_3362_c_51 Rep_3362_c_51_11 10643 10819 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3362_c_51 Rep_3362_c_51_12 11071 12807 + 3.A.1.135.5
TC Rep_3362_c_51 Rep_3362_c_51_13 12800 14614 + 3.A.1.135.5
CAZyme Rep_3362_c_51 Rep_3362_c_51_14 14808 15641 + CE4
Gene ID: Rep_3362_c_51_6
Type: TC
Location: 4981 - 5748 (+)
Gene ID: Rep_3362_c_51_7
Type: TC
Location: 5741 - 7738 (+)
Gene ID: Rep_3362_c_51_8
Type: TC
Location: 8007 - 8900 (+)
Gene ID: Rep_3362_c_51_9
Type: TC
Location: 9086 - 9763 (+)
Gene ID: Rep_3362_c_51_10
Type: TC
Location: 9777 - 10547 (+)
Gene ID: Rep_3362_c_51_11
Type:
Location: 10643 - 10819 (-)
Gene ID: Rep_3362_c_51_12
Type: TC
Location: 11071 - 12807 (+)
Gene ID: Rep_3362_c_51_13
Type: TC
Location: 12800 - 14614 (+)
Gene ID: Rep_3362_c_51_14
Type: CAZyme
Location: 14808 - 15641 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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