Cluster: Rep_3362_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3362
- CGC Family ID: CGCFAM_03118
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3362_c_40 | Rep_3362_c_40_1 | 23 | 943 | - | 3.A.1.1.9 |
| STP | Rep_3362_c_40 | Rep_3362_c_40_2 | 1043 | 2755 | - | SBP_bac_1 |
| TC | Rep_3362_c_40 | Rep_3362_c_40_3 | 3208 | 5058 | + | 9.B.33.1.1 |
| TF | Rep_3362_c_40 | Rep_3362_c_40_4 | 5033 | 6694 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_3362_c_40 | Rep_3362_c_40_5 | 7343 | 8371 | + | GT2 |
| CAZyme | Rep_3362_c_40 | Rep_3362_c_40_6 | 8374 | 9360 | + | GT2 |
Gene ID: Rep_3362_c_40_1
Type: TC
Location: 23 - 943 (-)
Type: TC
Location: 23 - 943 (-)
Gene ID: Rep_3362_c_40_2
Type: STP
Location: 1043 - 2755 (-)
Type: STP
Location: 1043 - 2755 (-)
Gene ID: Rep_3362_c_40_3
Type: TC
Location: 3208 - 5058 (+)
Type: TC
Location: 3208 - 5058 (+)
Gene ID: Rep_3362_c_40_4
Type: TF
Location: 5033 - 6694 (+)
Type: TF
Location: 5033 - 6694 (+)
Gene ID: Rep_3362_c_40_5
Type: CAZyme
Location: 7343 - 8371 (+)
Type: CAZyme
Location: 7343 - 8371 (+)
Gene ID: Rep_3362_c_40_6
Type: CAZyme
Location: 8374 - 9360 (+)
Type: CAZyme
Location: 8374 - 9360 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1264
Species
UMGS1264 sp904399395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.