Cluster: Rep_3362_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3362
- CGC Family ID: CGCFAM_08905
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3362_c_1 | Rep_3362_c_1_7 | 5062 | 5751 | - | 3.A.1.140.1 |
| STP | Rep_3362_c_1 | Rep_3362_c_1_8 | 6173 | 7258 | - | Diacid_rec |
| pfam | Rep_3362_c_1 | Rep_3362_c_1_9 | 7734 | 8213 | + | Pyridox_ox_2 |
| TC | Rep_3362_c_1 | Rep_3362_c_1_10 | 8380 | 9489 | - | 3.A.1.1.26 |
| pfam | Rep_3362_c_1 | Rep_3362_c_1_11 | 9799 | 10563 | - | PseudoU_synth_2 | S4 |
| pfam | Rep_3362_c_1 | Rep_3362_c_1_12 | 10668 | 11306 | - | DUF4830 |
| CAZyme | Rep_3362_c_1 | Rep_3362_c_1_13 | 11560 | 13362 | - | GH43_27 |
Gene ID: Rep_3362_c_1_7
Type: TC
Location: 5062 - 5751 (-)
Type: TC
Location: 5062 - 5751 (-)
Gene ID: Rep_3362_c_1_8
Type: STP
Location: 6173 - 7258 (-)
Type: STP
Location: 6173 - 7258 (-)
Gene ID: Rep_3362_c_1_9
Type: pfam
Location: 7734 - 8213 (+)
Type: pfam
Location: 7734 - 8213 (+)
Gene ID: Rep_3362_c_1_10
Type: TC
Location: 8380 - 9489 (-)
Type: TC
Location: 8380 - 9489 (-)
Gene ID: Rep_3362_c_1_11
Type: pfam
Location: 9799 - 10563 (-)
Type: pfam
Location: 9799 - 10563 (-)
Gene ID: Rep_3362_c_1_12
Type: pfam
Location: 10668 - 11306 (-)
Type: pfam
Location: 10668 - 11306 (-)
Gene ID: Rep_3362_c_1_13
Type: CAZyme
Location: 11560 - 13362 (-)
Type: CAZyme
Location: 11560 - 13362 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1264
Species
UMGS1264 sp904399395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.