Cluster: Rep_3356_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3356
- CGC Family ID: CGCFAM_10866
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3356_c_28 | Rep_3356_c_28_74 | 74743 | 76122 | + | GH4 |
| TF | Rep_3356_c_28 | Rep_3356_c_28_75 | 76226 | 77020 | + | HTH_DeoR |
| TC | Rep_3356_c_28 | Rep_3356_c_28_76 | 77085 | 78428 | + | 3.A.1.1.21 |
| TC | Rep_3356_c_28 | Rep_3356_c_28_77 | 78549 | 79478 | + | 3.A.1.1.21 |
| TC | Rep_3356_c_28 | Rep_3356_c_28_78 | 79475 | 80329 | + | 3.A.1.1.17 |
Gene ID: Rep_3356_c_28_74
Type: CAZyme
Location: 74743 - 76122 (+)
Type: CAZyme
Location: 74743 - 76122 (+)
Gene ID: Rep_3356_c_28_75
Type: TF
Location: 76226 - 77020 (+)
Type: TF
Location: 76226 - 77020 (+)
Gene ID: Rep_3356_c_28_76
Type: TC
Location: 77085 - 78428 (+)
Type: TC
Location: 77085 - 78428 (+)
Gene ID: Rep_3356_c_28_77
Type: TC
Location: 78549 - 79478 (+)
Type: TC
Location: 78549 - 79478 (+)
Gene ID: Rep_3356_c_28_78
Type: TC
Location: 79475 - 80329 (+)
Type: TC
Location: 79475 - 80329 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.